The state of conservation of animal genetic resources in Slovakia

Main Article Content

Ján Tomka
https://orcid.org/0000-0001-5959-1069
Ján Huba
Ivan Pavlík

Abstract

To effectively conserve animal genetic resources, countries need to periodically review their conservation efforts and reflect on actual problems and challenges. This study provides a review of animal genetic resources conservation activities, as well as the related existing legislative measures, strategies and funding in Slovakia. We present the development of endangered and supported breeds, discuss the impact of subsidies and the importance of awareness raising, and provide a SWOT analysis of the current animal genetic resources conservation framework in the country. In Slovakia, conservation is primarily based on animal breeding in natural conditions (in situ) without any limitations to breed improvement, and cryoconservation of animal genetic resources is in its initial phase. Most of the funding for conservation measures is provided by the Rural Development Programme. In general, the animal genetic resources system in Slovakia is open in terms of including new breeds eligible for support and this paper shows that the provided subsidies helped to stabilize most of the supported populations. Promoting the presence, characteristics and advantages of local breeds in times of intensive import of exotic breeds into the country is crucial to motivate breeders to prefer local livestock breeds. While the future challenge for the government is to improve conservation and facilitate related activities, research should address not only diversity, pedigree studies and cryoconservation, but also focus on the characterization of animal genetic resources for food security and climate change.

 

 

Article Details

How to Cite
Tomka, J., Huba, J. and Pavlík, I. (2022) “The state of conservation of animal genetic resources in Slovakia”, Genetic Resources, 3(6), pp. 49–63. doi: 10.46265/genresj.XRHU9134.
Section
Reviews
References

Blackburn, H D (2009). “Genebank development for the conservation of livestock genetic resources in the United States of America”. Livestock Science 120(3), pp. 196–203. DOI: https://doi.org/10.1016/j.livsci.2008.07.004. DOI: https://doi.org/10.1016/j.livsci.2008.07.004

Cao, J et al. (2021). “Monitoring and Progress in the Implementation of the Global Plan of Action on Animal Genetic Resources”. Sustainability 13(2), pp. 775–775. DOI: https://doi.org/10.3390/su13020775. DOI: https://doi.org/10.3390/su13020775

CBD (1992). Convention on Biological Diversity. URL: http://www.cbd.int/convention/text.

CBD (2011). Nagoya Protocol on Access to Genetic Resources and the Fair and Equitable Sharing of Benefits Arising from their Utilization to the Convention on Biological Diversity. Montreal, Canada. URL: https://www.cbd.int/abs/doc/protocol/nagoya-protocol-en.pdf.

Danchin-Burge, C, S J Hiemstra, and H Blackburn (2011). “Ex situ conservation of Holstein-Friesian cattle: Comparing the Dutch, French, and US germplasm collections”. J. Dairy Sci 94(8), pp. 4100–4108. DOI: https://doi.org/10.3168/jds.2010-3957. DOI: https://doi.org/10.3168/jds.2010-3957

EU (2005). Council Regulation (EC) No 1698/2005 of 20 September 2005 on support for rural development by the European Agricultural Fund for Rural Development (EAFRD). URL: http://data.europa.eu/eli/reg/2005/1698/oj.

EU (2006). Commission Regulation (EC) No 1974/2006 of 15 December 2006 laid down detailed rules for the application of Council Regulation (EC) No 1698/2005 on support for rural development by the EAFRD. URL: http://data.europa.eu/eli/reg/2006/1974/oj.

EU (2013). Regulation (EU) No 1305/2013 of the European Parliament and of the Council of 17 December 2013 on support for rural development by the European Agricultural Fund for Rural Development. URL: http://data.europa.eu/eli/reg/2013/1305/oj.

EU (2014a). Commission Delegated Regulation (EU) No 807/2014 of 11 March 2014 supplementing Regulation (EU) No 1305/2013 of the European Parliament and the Council on support for rural development by the EAFRD. URL: http://data.europa.eu/eli/reg_del/2014/807/oj.

EU (2014b). Regulation (EU) No 511/2014 of the European Parliament and of the Council of 16 April 2014 on compliance measures for users from the Nagoya Protocol on Access to Genetic Resources and the Fair and Equitable Sharing of Benefits Arising from their Utilization in the Union. URL: http://data.europa.eu/eli/reg/2014/511/oj.

EU (2016). Regulation (EU) 2016/1012 of the European Parliament and of the Council of 8 June 2016 on zootechnical and genealogical conditions for the breeding, trade in and entry into the Union of purebred breeding animals, hybrid breeding pigs and the germinal products. URL: https://eur-lex.europa.eu/eli/reg/2016/1012/oj.

Evans, N and R Yarwood (2000). “The Politicization of Livestock: Rare Breeds and Countryside Conservation”. Sociologia Ruralis 40(2), pp. 228–248. DOI: https://doi.org/10.1111/1467-9523.00145. DOI: https://doi.org/10.1111/1467-9523.00145

Falconer, D S and T F C Mackay (1996). Introduction to Quantitative Genetics. Essex, UK: Longman, p. 480.

FAO (2005). The legal framework for the management of animal genetic resources. Rome, Italy: FAO, p. 168. URL: http://www.fao.org/3/a-a0276e.pdf.

FAO (2007). Global Plan of Action for Animal Genetic Resources and the Interlaken Declaration. Rome, Italy: FAO. URL: https://www.fao.org/3/a1404e/a1404e.pdf.

FAO (2013). In vivo conservation of animal genetic resources. Rome, Italy: FAO, p. 270. URL: http://www.fao.org/3/i3327e/i3327e.pdf.

FAO (2015). The Second Report on the State of the World’s Animal Genetic Resources for Food and Agriculture. Vol. 562. Rome, Italy: FAO. URL: http://www.fao.org/3/a-i4787e.pdf.

FAO (2019). The State of the World’s Biodiversity for Food and Agriculture. Rome, Italy: FAO. URL: http://www.fao.org/3/ca3129en/CA3129EN.pdf.

Gandini, G C and J K Oldenbroek (1999). “Choosing the conservation strategy”. In: Genebanks and the Conservation of Farm animal Genetic Resources. Ed. by J K Oldenbroek. Lelystad, The Netherlands: ID-DLO, pp. 11–32.

Gicquel, E et al. (2020). “Impact of conservation measures on demography and genetic variability of livestock breeds”. Animal 14(4), pp. 670–680. DOI: https://doi.org/10.1017/S1751731119002672. DOI: https://doi.org/10.1017/S1751731119002672

Groeneveld, L F et al. (2016). “Domesticated Animal Biobanking: Land of Opportunity”. PLoS Biol 14(7), pp. 1002523–1002523. DOI: https://doi.org/10.1371/journal.pbio.1002523. DOI: https://doi.org/10.1371/journal.pbio.1002523

Herold, P et al. (2012). “Development of organisation and planning in animal breeding: I. A review on breeding organisation”. Arch. Anim. Breed 55(4), pp. 402–414. DOI: https://doi.org/10.5194/aab-55-402-2012. DOI: https://doi.org/10.5194/aab-55-402-2012

Kadleˇcík, O, E Hazuchová, I Pavlík, et al. (2013). “Diversity of cattle breeds in Slovakia”. Slovak J. Anim. Sci 46(4), pp. 145–150. URL:https://office.sjas-journal.org/index.php/sjas/article/view/256.

Kadleˇcík, O, E Hazuchová, N Moravˇcíková, et al. (2017). “Genetic diversity in Slovak Spotted breed”. AGROFOR International Journal 2(3), pp. 124–131. DOI: https://doi.org/10.7251/AGRENG1703124K. DOI: https://doi.org/10.7251/AGRENG1703124K

Kasarda, R, N Moravˇcíková, and O Kadleˇcík (2018). “Genetic structure of warmblood horses on molecular-genetic level”. Agriculture & Forestry 64(1), pp. 7–13. DOI: https://doi.org//10.17707/AgricultForest.64.1.01. DOI: https://doi.org/10.17707/AgricultForest.64.1.01

Kasarda, R, N Moravˇcíková, O Kadleˇcík, et al. (2019). “Level of inbreeding in Norik of Muran horse: pedigree vs. genomic data”. Acta Universitatis Agriculturae et Silviculturae Mendelianae Brunensis 67(6), pp. 1457–1463. DOI: https://doi.org//10.11118/actaun201967061457. DOI: https://doi.org/10.11118/actaun201967061457

Kasarda, R, O Kadleˇcík, et al. (2019). “Genomic and pedigree-based inbreeding in Slovak Spotted cattle”. AGROFOR International Journal 4(1), pp. 102–110. DOI: https://doi.org//10.7251/AGRENG1901102K. DOI: https://doi.org/10.7251/AGRENG1901102K

Kompan, D (2014). Overview and assessment of support measures for endangered livestock breeds: Subsibreed: Final project report. European Regional Focal Point for Animal Genetic Resources - ERFP, p. 262.

Kukuˇcková, V et al. (2017). “Genomic characterization of Pinzgau cattle: genetic conservation and breeding perspectives”. Conservation Genetics 18(4), pp. 893–910. DOI: https://doi.org//10.1007/s10592-017-0935-9. DOI: https://doi.org/10.1007/s10592-017-0935-9

Lauvie, A et al. (2011). “Diversity of rare breed management programs: Between conservation and development”. Livestock Science 140(1-3), pp. 161–170. DOI: https://doi.org/10.1016/j.livsci.2011.03.025. DOI: https://doi.org/10.1016/j.livsci.2011.03.025

Leroy, G, P Boettcher, et al. (2019). “Cryoconservation of Animal Genetic Resources in Europe and Two African Countries: A Gap Analysis”. Diversity 11(12), pp. 240–240. DOI: https://doi.org/10.3390/d11120240. DOI: https://doi.org/10.3390/d11120240

Leroy, G, I Hoffmann, et al. (2018). “Perception of livestock ecosystem services in grazing areas”. Animal 12(12), pp. 2627–2638. DOI: https://doi.org/10.1017/S1751731118001027. DOI: https://doi.org/10.1017/S1751731118001027

Ligda, C and M Zjalic (2011). “Conservation of animal genetic resources in Europe: overview of the policies, activities, funding and expected benefits of conservation activities”. Animal Genetic Resources 49, pp. 75–86. DOI: https://doi.org/10.1017/S2078633611000075. DOI: https://doi.org/10.1017/S2078633611000075

MP SR (2003). Plán rozvoja vidieka Slovenskej republiky 2004-2006. [Rural Development Plan of Slovak Republic 2004-2006]. Bratislava: Ministry of Agriculture of the Slovak Republic, p176. URL: https://www.mpsr.sk/?navID=2%5C&navID2=2%5C&sID=43%5C&id=62.

MP SR (2007). Program rozvoja vidieka SR 2007-2013. [Rural Development Programme of the Slovak Republic 2007-2013], p. 332. URL: https://www.mpsr.sk/program-rozvoja-vidieka- sr-2007-2013-verzia-c-8-platna-od-12-08-2015/296-43-296-10133/.

MP SR (2015). Program rozvoja vidieka SR 2014-2020. [Rural Development Programme of the Slovak Republic 2014-2020]. Bratislava: Ministry of Agriculture of the Slovak Republic, p.722. URL: https://www.mpsr.sk/download.php?fID=20584.

MZe CR (2017). “Národní program konzervace a využívání genetických zdroju˚ rostlin, zvíˇrat a mikroorganismu˚ významných pro výživu a zemˇedˇelství na období 2018–2022 [National programme for conservation and use of genetic resources of plants, animals and microorganisms valuable for food and agriculture 2018-2022]”. In: Prague: Ministry of Agriculture of the Czech Republic, p. 60. DOI: https://eagri.cz/public/web/file/552763/Narodni_program_konzervace_FINAL.pdf.

MZP SR (2013). Aktualizovaná árodná stratégia ochrany biodiverzity do roku 2020 [Updated national strategy for biodiversity protection 2020]. Bratislava: Ministry of Environment of the Slovak Republic. URL: https://www.minzp.sk/files/sekcia- ochranyprirodyakrajiny/dohovory/biodiverzita/narodna_strateg_ochr_biodiverz_2020.pdf.

MZP SR (2018). Stratégia adaptácie SR na zmenu klímy. [Adaptation Strategy of the Slovak Republic to the climate change]. Bratislava: Ministry of Environment of the Slovak Republic, p. 145. DOI: https://www.minzp.sk/files/odbor-politiky-zmeny-klimy/strategia-adaptacie-sr- zmenu-klimy-aktualizacia.pdf.

Oravcová, M (2013). “Pedigree analysis in White Shorthaired goat: First results”. Archiv Tierzucht 56, pp. 547–554. DOI: https://doi.org/10.7482/0003-9438-56-053. DOI: https://doi.org/10.7482/0003-9438-56-053

Oravcová, M, L Hetényi, et al. (2006). “Analyse of farm animals breeds from the view of effective size of population”. Acta fytotechnica et zootechnica 9, pp. 156–159.

Oravcová, M, J Huba, L Hetényi, et al. (2004). “Farm animal genetic resources in the Slovak Republic”. Czech J. Anim. Sci 49(10), pp. 430–435. DOI: https://doi.org/10.17221/4328-CJAS. DOI: https://doi.org/10.17221/4328-CJAS

Oravcová, M, J Huba, D Peškoviˇcová, et al. (2010). “Monitoring system of breed and species diversity of farm animals in the Slovak Republic”. Acta fytotechnica et zootechnica 11, pp. 23–27.

Oravcová, M and M Margetín (2011). “Preliminary assessment of trends in inbreeding and average relatedness of the former valachian sheep”. Slovak J. Anim. Sci 44(3), pp. 90–96. URL: https://office.sjas-journal.org/index.php/sjas/article/view/309/297.

Passemard, A et al. (2018). Inventory and mapping of European animal genetic collections, IDELE, IMAGE (Innovative Management of Animal Genetic Resources) project report. URL: https://www.imageh2020.eu/deliverable/WP2.pdf.

Pavlík, I, K Koˇcík, et al. (2017). Rodokmenˇová analýza populácie oviec plemena pôvodná valaška na Slovensku. [Pedigree analysis of Valachian sheep population in Slovakia]. Lužianky, Slovakia: National Agricultural and Food Center, p. 44.

Pavlík, I, O Kadleˇcík, et al. (2013). “Comparison of genetic diversity in dual-purpose and beef Pinzgau populations”. Acta fytotechnica et zootechnica 16(3), pp. 69–73. URL: https://afz.fapz.uniag.sk/legacy/journal/index.php/on_line/article/view/74.html.

Pizzi, F et al. (2016). “Implementation and cost analysis of a regional farm animal cryobank: an Italian case study”. Italian J. of Anim. Sci 15(2), pp. 207–210. DOI: https://doi.org/10.1080/1828051X.2016.1153406. DOI: https://doi.org/10.1080/1828051X.2016.1153406

Pjontek, J et al. (2012). “Pedigree analysis in four Slovak endangered horse breeds”. Czech J. Anim. Sci 57(2), pp. 54–64. URL: https://www.agriculturejournals.cz/publicFiles/58324.pdf. DOI: https://doi.org/10.17221/5132-CJAS

Santiago, E and A Caballero (1995). “Effective size of populations under selection”. Genetics 139(2), pp. 1013–1030. DOI: https://doi.org/10.1093/genetics/139.2.1013. DOI: https://doi.org/10.1093/genetics/139.2.1013

Šidlová, V et al. (2015). “Production type of Slovak Pinzgau cattle in respect of related breeds”. Acta fytotechnica et zootechnica 18(2), pp. 25–29. DOI: http://dx.doi.org/10.15414/afz.2015.18.02.25-29. DOI: https://doi.org/10.15414/afz.2015.18.02.25-29

Silva, R De Oliveira et al. (2019). “Optimizing ex situ genetic resource collections for European livestock conservation”. J. Anim. Breed. Genet 136(1), pp. 63–73. DOI: https://doi.org/10.1111/jbg.12368. DOI: https://doi.org/10.1111/jbg.12368

Tomka, J and J Huba (2019). “Animal genetic resources in Slovak Republic”. In: 30th Annual Meeting of DAGENE 2019. Danubian Animal Genetic Resources, pp. 7–11.

Tomka, J, M Oravcová, and J Huba (2016). “Development of animal genetic resources in the Slovak Republic”. Acta fytotechnica et zootechnica 19, pp. 45–47. DOI: https://doi.org/10.15414/afz.2016.19.si.45-47. DOI: https://doi.org/10.15414/afz.2016.19.si.45-47

Velado-Alonso, E, I Morales-Castilla, and A Gómez-Sal (2020). “Recent land use and management changes decouple the adaptation of livestock diversity to the environment”. Sci. Reports 10, pp. 21035–21035. DOI: https://doi.org/10.1038/s41598-020-77878-2. DOI: https://doi.org/10.1038/s41598-020-77878-2

Verrier, E et al. (2005). “Conservation and value of local livestock breeds: Usefulness of niche products and/or adaptation to specific environments”. Animal Genetic Resources 36, pp. 21–31. DOI: https://doi.org/10.1017/S1014233900005538. DOI: https://doi.org/10.1017/S1014233900005538

Wanner, A, U Pröbstl-Haider, and M Feilhammer (2021). “The future of Alpine pastures - Agricultural or tourism development? Experiences from the German Alps”. Journal of Outdoor Recreation and Tourism 35, pp. 100405–100405. DOI: https://doi.org/10.1016/j.jort.2021.100405. DOI: https://doi.org/10.1016/j.jort.2021.100405

Weis, J and C Hrnˇcár (2009). “Population size of autochthonous and locally adapted hen’s breeds on area of the Slovak Republic”. Scientific Papers Animal Science and Biotechnologies 42(2), pp. 456–461.

Wilson, G A (1996). “Farmer Environmental Attitudes and ESA Participation”. Geoforum 27(2), pp. 10–13. URL: https://doi.org/10.1016/0016-7185(96)00010-3. DOI: https://doi.org/10.1016/0016-7185(96)00010-3

Yarwood, R and N Evans (1998). “New places for ‘old spots’: the changing geographies of domestic livestock animals”. Society and Animals 6(2), pp. 137–165. DOI: https://doi.org/10.1163/156853098x00122. DOI: https://doi.org/10.1163/156853098X00122