Phenomic characterization of Crotalaria germplasm in Embrapa’s genebank, Brazil
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Abstract
This study aimed to evaluate the morphological diversity of 22 Crotalaria accessions conserved in the Embrapa Cerrados germplasm bank, Brazil, with emphasis on their potential use in breeding and genetic resource management. Sixteen morphological descriptors were analyzed, revealing substantial phenotypic variation among accessions. Plant height ranged from 45 to 146cm, and leaflet and seed traits also showed broad variation, reflecting a wide adaptive spectrum. The Shannon–Weaver (H) and Simpson (D) diversity indices indicated consistently high diversity across traits (mean H = 0.964; mean D = 0.940), confirming the existence of a rich genetic base within the collection. Principal component analysis showed that the first two components explained 63.72% of total variance, with reproductive traits such as seed length, seed width, and 100-seed weight contributing most to variation among accessions. Cluster analysis grouped the accessions into five distinct morphological clusters, identifying genotypes with superior plant vigour, leaf area, or seed characteristics as potential parents for future breeding programmes. The observed morphological variability highlights the significant genetic diversity within Crotalaria germplasm, supporting its value for selection, hybridization and conservation. The combination of diversity indices and multivariate analyses provides a robust framework for identifying promising accessions for breeding programmes targeting biomass production, seed yield and environmental adaptation. These findings reinforce the importance of maintaining and characterizing germplasm collections as strategic reservoirs for sustainable crop improvement and the long-term conservation of genetic resources.
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